Author

Yang Liu

BGI Group (China)ORCID 0000-0001-7294-8763Unclaimed ORCID profile · follow to get notified of new preprints

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Yang Liu44 papers · BGI Group (China)

Biology Disciplines

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Developmental Biology· 1 Genetic & Genomic Medicine· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Alma AnderssoniD· 1 shared Andrés QuinteroiD· 1 shared Carl HerrmanniD· 1 shared Christoffer Mattsson LangsethiD· 1 shared Christophe AveneliD· 1 shared Chuanyu LiuiD· 1 shared Daniel GyllborgiD· 1 shared Dongsheng CheniD· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperDevelopmental Biology

Alma AnderssonORCID

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3 papers

Recent·Most cited

Decoding spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin

Xiaofei Li, Žaneta Andrusivová, Paulo Czarnewski, Christoffer Mattsson Langseth, Alma Andersson, Yang Liu, Daniel Gyllborg, Emelie Braun, Ludvig Larsson, Lijuan Hu, Zhanna Alekseenko, Hower Lee, Christophe Avenel, Helena Kopp Kallner, Elisabet Åkesson, , Erik Sundström

The paper creates a developmental cell atlas of the human spinal cord using single-cell and spatial transcriptomics, revealing spatiotemporal gene regulation and novel insights into ependymoma cancer stem cells.

Nature Neuroscience · Apr 24, 2023Peer-reviewedDevelopmental Biology

Random-effect based test for multinomial logistic regression: choice of the reference level and its impact on the testing

Qianchuan He, Yang Liu, Meiling Liu, Michael C. Wu, Li Hsu

The paper investigates the impact of reference level choice on multinomial logistic regression random-effect score tests and proposes invariant procedures.

medRxiv · Apr 13, 2021 · PreprintGenetic & Genomic Medicine

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

Longqi Liu, Chuanyu Liu, Andrés Quintero, Liang Li Wu, Yue Yuan, Mingyue Wang, Mengnan Cheng, Lizhi Leng, Liqin Xu, Guoyi Dong, Rui Li, Yang Liu, Xiaoyu Wei, Jiangshan Xu, Xiaowei Chen, , Xun Xu

The paper introduces scCAT-seq, a method to simultaneously assay chromatin accessibility and transcriptome in single cells, and demonstrates its application in human pre-implantation embryos to reveal regulatory heterogeneity.

Nature Communications · Jan 28, 2019Peer-reviewedGenomics