Author

Senka Čaušević

University of LausanneORCID 0000-0001-7930-3968Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:clustering· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

Jan Roelof van der MeeriD· 3 shared Anna SintsovaiD· 2 shared Vladimir SentchiloiD· 2 shared Adline Vouillamoz· 1 shared Christian MazzaiD· 1 shared Christian von MeringiD· 1 shared Clara A. BaileyiD· 1 shared Davin Wijaya· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersMicrobiology

Jan Roelof van der MeerORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Systems BiologybioRxivPreprintOct 19, 2026

Genome-scale metabolic models for a synthetic soil microbial community as a path for understanding community functioning

Omar S. Keshk, Evangelia Vayena, Senka Čaušević…·Vassily Hatzimanikatis A

The paper develops genome-scale metabolic models for a synthetic soil microbial community to understand metabolic interactions and community function.

DOI 10.64898/2026.10.16.759588

metabolomicsstatistical model

𝕏 PostBluesky

MicrobiologybioRxivPreprintJul 10, 2026

Biphasic bacterial community assembly predicted from generalized first principles of monoculture growth and inferred species interactions

Isaline Guex, Melanie L. Stäubli, Anna Sintsova…·Jan Roelof van der Meer

The paper develops a mathematical framework to predict microbial community assembly using monoculture growth kinetics and inferred species interactions, revealing biphasic community development driven by competition and cross-feeding.

DOI 10.64898/2026.07.10.737752

bacteria (other)metagenomics

𝕏 PostBluesky

MicrobiologyThe ISME JournalPeer-reviewedJan 1, 2025

Habitat filtering but not microbiota origin controls microbiome transplant outcomes in soil

Senka Čaušević, Janko Tackmann, Vladimir Sentchilo…·Jan Roelof van der Meer

The paper investigates how microbiota origin affects transplant outcomes in soil, finding that habitat filtering, not origin, determines success.

20 citationstop 1%

metagenomicsexperimental assay

𝕏 PostBluesky