Charlotte Rich‐Griffin

hadge combines hashing and genotype-based deconvolution methods to recover previously discarded cells in single-cell data.

Panpipes provides computational workflows for multiomic single-cell and spatial transcriptomic analysis, enabling quality control, preprocessing, integration, clustering, and reference mapping.

The paper shows that neuroinflammation in OPCs causes major transcriptomic changes by exploiting a primed epigenetic landscape rather than altering chromatin accessibility, leading to white matter injury.

The paper identifies disease-specific biochemical and metabolic signatures in progressive multiple sclerosis using multiomic profiling and spatial techniques.

Photizo is an open-source Python library for analyzing FTIR spectroscopy data, offering pre-processing, visualization, and analysis tools for both non-spatial and spatially-resolved datasets.

The paper identifies cell type-specific immune responses in Arabidopsis roots using transcriptome analysis of elicitors, showing that cell identity networks integrate with immunity networks.