Author

Othmane Hayoun-Mya

Barcelona Supercomputing CenterORCID 0000-0001-8243-7051Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Organism:E. coli· 1 Organism:mouse· 1 Approach:simulation· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Alfonso ValenciaiD· 2 shared Marco RusconeiD· 2 shared Paul MackliniD· 2 shared Randy W. HeilandiD· 2 shared Adam ŠmelkoiD· 1 shared Alejandro Madrid-ValienteiD· 1 shared Alexander George FletcheriD· 1 shared Arnau MontagudiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersSystems Biology

Alfonso ValenciaORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintSep 3, 2026

PhysiCelldFBA: Linking single-cell genome-scale metabolism to spatially explicit multicellular dynamics

Marco Ruscone, Othmane Hayoun-Mya, Randy W. Heiland…·Miguel Ponce-de-León

PhysiCelldFBA links single-cell metabolism to multicellular spatial dynamics by integrating genome-scale metabolic models with agent-based simulations.

DOI 10.64898/2026.09.02.748294

E. colimouse

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Systems BiologybioRxivPreprintJul 16, 2025

Open Benchmarking for Cell-Based Multiscale Models: Lessons from a Community Initiative

Thaleia Ntiniakou, James M. Osborne, Jieling Zhao…·Arnau Montagud

This paper presents a community-driven benchmarking initiative for cell-based multiscale models, highlighting variations in tool implementations and advocating for standardized benchmarks and interoperability.

DOI 10.1101/2025.07.16.664358

benchmark studybenchmarking

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