Author

Ana E. Gomez Martinez

University of California, BerkeleyORCID 0000-0001-8759-4400Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioengineering· 3

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:human· 3 Assay:proteomics· 2 Assay:bulk RNA-seq· 1 Assay:scATAC-seq· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Amy E. HerriD· 3 shared Trinh LamiD· 3 shared Anna Fomitcheva KhartchenkoiD· 2 shared Md Nazibul IslamiD· 2 shared Xin WangiD· 2 shared Alison SuiD· 1 shared Amber C. LennoniD· 1 shared Cyril DeroyiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersBioengineering

Amy E. HerrORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

BioengineeringbioRxivPreprintOct 16, 2026

Same-cell mapping of epigenetic regulatory state to functional proteomic output

Xin Wang, Md Nazibul Islam, Cyril Deroy…·Amy E. Herr

Proteo-Seq links chromatin accessibility and proteomic output in the same cell, revealing new protein-defined states in breast cancer cells.

DOI 10.64898/2026.10.15.759447

humanscATAC-seq

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BioengineeringAdvanced SciencePeer-reviewedSep 29, 2025

Single-cell Organelle Extraction with Cellular Indexing

Trinh Lam, Ana E. Gomez Martinez, Alison Su…·Amy E. Herr

The paper introduces VacTrap, a microfluidic device that isolates and spatially indexes single nuclei from mammalian cells with high efficiency, enabling single-cell multiomics applications.

1 citation

humanbulk RNA-seq

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BioengineeringAnalytical ChemistryPeer-reviewedJul 9, 2025

Paired Analyses of Nuclear Protein Targets and Genomic DNA by Single-Cell Western Blot and Single-Cell PCR

Ana E. Gomez Martinez, Trinh Lam, Amy E. Herr

The paper introduces SplitBlot, a microfluidic single-cell assay that pairs genomic DNA analysis with nucleo-cytoplasmic protein measurements from the same cell.

1 citation

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