Author
Warsaw University of TechnologyORCID 0000-0001-8890-9988Unclaimed ORCID profile · follow to get notified of new preprints
3 papers
Recent·Most cited
Karolina Jodkowska, Zofia Parteka-Tojek, Abhishek Agarwal…·Dariusz Plewczyński
The paper introduces an improved cohesin HiChIP protocol and analysis pipeline to enhance detection of chromatin loops and stripes.
Maciej Borodzik, Michał Denkiewicz, Krzysztof Spaliński…·Dariusz Plewczyński
The paper introduces a graph-theoretic algorithm to identify CTCF-mediated chromatin loops that are linked in 3D space using ChIA-PET data, finding non-random linked regions with distinct centrality metrics.
Kaustav Sengupta, Michał Denkiewicz, Mateusz Chiliński…·Dariusz Plewczyński
The paper models chromatin folding using explosive percolation theory and shows that 80% of loops are needed for 3D condensation across cell lines.