Abhishek Agarwal

The paper investigates TCF7L2 isoform redundancy in thalamic development, finding β-catenin-independent regulation and a developmental switch in activity.

This study identifies epigenetic regulatory elements linked to breast cancer by analyzing multi-omics data and reveals potential biomarkers and therapeutic targets.

The paper introduces RepliSage, a framework that dynamically integrates replication timing, loop extrusion, and compartmentalization to simulate chromatin architecture during the cell cycle.

The paper introduces an improved cohesin HiChIP protocol and analysis pipeline to enhance detection of chromatin loops and stripes.

The paper improves gene expression prediction models by incorporating protein-mediated spatial chromatin interactions, resulting in significant performance gains across multiple cell lines.