Author
University of Maryland, BaltimoreORCID 0000-0001-8910-9851Unclaimed ORCID profile · follow to get notified of new preprints
7 papers
Recent·Most cited
Abigayle M. R. Simpson, Elisha M. Wood‐Charlson, Montana L. Smith…·Roland C. Wilhelm
The paper introduces a data standard (MISIP) to improve reproducibility and reuse of stable isotope probing (SIP) sequencing data by defining essential metadata fields.
Rebecca Jackson, Nicolas Matentzoglu, James A. Overton…·Bjoern Peters
The paper describes how the OBO Foundry formalized its principles into operational rules and implemented automated checks to evaluate ontology compliance, improving interoperability and quality.
Kilannin Krysiak, Arpad M. Danos, Susanna Kiwala…·Malachi Griffith
The paper describes the evolution of the CIViC knowledgebase to meet the needs of the cancer variant interpretation community by expanding its functionality and data types.
Nikhita Gogate, Daniel Lyman, Amanda L. Bell…·Raja Mazumder
The paper extends a cancer biomarker data model to create a COVID-19 biomarker knowledgebase, integrating 138 biomarkers and 265 type combinations with ontological annotations.
Alex Handler Wagner, Brian Walsh, Georgia Mayfield…·Adam A. Margolin
The paper harmonizes clinical interpretations of cancer genomic variants across six knowledgebases, improving overlap and matching with patient cohorts.
Andra Waagmeester, Gregory S. Stupp, Sebastian Burgstaller-Muehlbacher…·Andrew I. Su
The paper describes Wikidata as a FAIR knowledge graph for life sciences, showcasing its breadth, tools for integration, and use cases in biomedical analysis.
Elvira Mitraka, Andra Waagmeester, Sebastian Burgstaller-Muehlbacher…·Benjamin M. Good
The paper describes Wikidata as a platform for integrating and disseminating life science data, linking genes, drugs, and diseases to enhance Wikipedia and foster community collaboration.