Author

Murat Arcak

University of California, BerkeleyORCID 0000-0001-9060-4032Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioengineering· 1 Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

Calin A. BeltaiD· 1 shared Dirk BenzingeriD· 1 shared Eric Palanques-TostiD· 1 shared Hanna KrasowskiiD· 1 shared Melinda Liu PerkinsiD· 1 shared Mustafa KhammashiD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 6 mutual co-author links

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1 shared paperBioengineering

Calin A. BeltaORCID

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2 papers

Recent·Most cited

BioengineeringbioRxivPreprintDec 9, 2024

Learning Biomolecular Models using Signal Temporal Logic

Hanna Krasowski, Eric Palanques-Tost, Calin A. Belta, Murat Arcak

The paper develops a method to infer biomolecular models from qualitative behaviors using Signal Temporal Logic and genetic algorithms, with gradient-based parameter estimation.

1 citation

deep learningstatistical model

𝕏 PostBluesky

Synthetic BiologyNature CommunicationsPeer-reviewedMar 13, 2020

Cell-in-the-loop pattern formation with optogenetically emulated cell-to-cell signaling

Melinda Liu Perkins, Dirk Benzinger, Murat Arcak, Mustafa Khammash

The paper introduces a cell-in-the-loop approach to synthetic biology pattern formation, demonstrating checkerboard patterning through optogenetic signaling emulated in silico.

45 citations

experimental assay

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