Author

Anna Sophie Berghoff

Medical University of ViennaORCID 0000-0001-9379-6797Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 3 Organism:human· 3 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Adé la BrzobohatáiD· 1 shared Adelheid Wöhrer· 1 shared Albert JeltschiD· 1 shared Andreas KienzleiD· 1 shared Angelika Beate RiemeriD· 1 shared Angelika M. Starzer· 1 shared Angelo DipasqualeiD· 1 shared Barbara KieseliD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperCancer Biology

Adé la BrzobohatáORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

ImmunologybioRxivPreprintSep 26, 2026

Mutanome-guided immunopeptidomics of blood plasma for neoepitope detection in solid tumors is constrained by cfDNA variant calling sensitivity and MS detection limits

Andreas Kienzle, Jonas Philipp Becker, Birgit Fendl…·Angelika Beate Riemer

The paper uses plasma immunopeptidomics guided by mutanomes to detect neoepitopes in solid tumors, finding that cfDNA variant calling sensitivity and MS detection limits constrain plasma-based detection.

DOI 10.64898/2026.09.21.753080

humanproteomics

𝕏 PostBluesky

Cancer BiologyCell Reports MedicinePeer-reviewedMar 1, 2026

TET CpG sequence context specific DNA demeth-ylation shapes progression of IDH-mutant gliomas

Youri Hoogstrate, Santoesha A. Ghisai, Levi van Hijfte…·Pim J. French

The paper identifies DNA methylation changes during IDH-mutant glioma progression, links them to TET enzyme activity, and develops a methylation-based grading system that outperforms WHO grading.

2 citationstop 3%

humanDNA methylation

𝕏 PostBluesky

Cancer BiologyActa Neuropathologica CommunicationsPeer-reviewedMay 3, 2025

Identification and characterization of tertiary lymphoid structures in brain metastases

Sadaf Shabbir Mughal, Yvonne Reiss, Jörg Felsberg…·Guido Reifenberger

The paper identifies tertiary lymphoid structures in brain metastases from different cancer types and links their presence to patient survival.

18 citationstop 2%

humanbulk RNA-seq

𝕏 PostBluesky