Author

B. R. Prashantha Kumar

Australian National UniversityORCID 0000-0001-9503-741XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1

Frequent Co-Authors

A.J. SethiiD· 1 shared Agin RavindraniD· 1 shared Alice CleyneniD· 1 shared Eduardo EyrasiD· 1 shared Helaine Graziele Santos VieiraiD· 1 shared Katrina Woodward· 1 shared Minna‐Liisa ÄnköiD· 1 shared Nikolay E. ShirokikhiD· 1 shared

Activity by Year

2024-2024 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

A.J. SethiORCID

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1 paper

Recent·Most cited

High-Accuracy RNA Integrity Definition for Unbiased Transcriptome Comparisons with INDEGRA

Alice Cleynen, Agin Ravindran, A.J. Sethi, B. R. Prashantha Kumar, Tanya Javaid, Shafi Mahmud, Katrina Woodward, Helaine Graziele Santos Vieira, Minna‐Liisa Änkö, Robert J. Weatheritt, Eduardo Eyras, Stephane S. Robin, Nikolay E. Shirokikh

The paper introduces DTI, a new RNA integrity metric based on nanopore sequencing, and the INDEGRA package to correct biases and enable accurate transcriptome comparisons.

bioRxiv · Dec 12, 2024 · PreprintBioinformatics