Author

Nina Verstraete

Université Toulouse III - Paul SabatierORCID 0000-0001-9694-3641Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:deconvolution· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Véra PancaldiiD· 3 shared Jean‐Jacques FourniéiD· 2 shared Loïc YsebaertiD· 2 shared Malvina MarkuiD· 2 shared Marcin DomagalaiD· 2 shared Mary PoupotiD· 2 shared Miguel Madrid-MencíaiD· 2 shared Abdelmounim EssabbariD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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3 shared papersSystems Biology

Véra PancaldiORCID

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3 papers

Recent·Most cited

Systems BiologyiSciencePeer-reviewedMay 19, 2023

An Agent-Based Model of monocyte differentiation into Tumour-Associated Macrophages in Chronic Lymphocytic Leukemia

Nina Verstraete, Malvina Marku, Marcin Domagala…·Véra Pancaldi

The paper develops an agent-based model to simulate monocyte differentiation into nurse-like cells in chronic lymphocytic leukemia and identifies patient-specific macrophage phenotypes linked to cancer survival.

8 citations

humanexperimental assay

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BioinformaticsbioRxivPreprintApr 9, 2021

GEM-DeCan: Improved tumor immune microenvironment profiling through novel gene expression and DNA methylation signatures predicts immunotherapy response

Ting Xie, Jacobo Solórzano, Miguel Madrid-Mencía…·Véra Pancaldi

The paper introduces new gene expression and DNA methylation signatures for tumor immune microenvironment profiling, showing improved performance in predicting immunotherapy response.

2 citations

humanbulk RNA-seq

𝕏 PostBluesky

Systems BiologybioRxivPreprintOct 14, 2020

A Boolean Model of the Formation of Tumour Associated Macrophages in an in-vitro Model of Chronic Lymphocytic Leukaemia

Malvina Marku, Flavien Raynal, Nina Verstraete…·Véra Pancaldi

The paper builds a Boolean model to simulate macrophage polarization in an in-vitro chronic lymphocytic leukaemia model, revealing the formation of tumour-associated macrophages.

DOI 10.1101/2020.10.14.337642

statistical model

𝕏 PostBluesky