Author

Anthony S. Castanza

University of California San DiegoORCID 0000-0001-9795-0720Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1

Frequent Co-Authors

Jill P. MesiroviD· 2 shared Alexander T. WenzeliD· 1 shared Carol J. BultiD· 1 shared David EbyiD· 1 shared Farhoud FarajiiD· 1 shared Gayathri Donepudi· 1 shared Helga Thorvaldsdóttir· 1 shared Jean Y. J. WangiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBioinformatics

Jill P. MesirovORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintNov 3, 2024

Data driven refinement of gene expression signatures for enrichment analysis

Alexander T. Wenzel, Farhoud Faraji, Kuniaki Sato…·Jill P. Mesirov

The paper refines gene expression signatures using multi-omics data to improve enrichment analysis by addressing lack of coordinate expression in gene sets.

DOI 10.1101/2024.11.03.621768

bulk RNA-seqstatistical model

BioinformaticsbioRxivPreprintOct 24, 2022

The Molecular Signatures Database Revisited: Extending Support for Mouse Data

Anthony S. Castanza, Jill M. Recla, David Eby…·Jill P. Mesirov

The paper extends the Molecular Signatures Database to support mouse gene data by adding mouse-specific gene sets and improved orthology mapping resources.

1 citation

mousebulk RNA-seq