Author

David Eby

University of California San DiegoORCID 0000-0001-5771-0300Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:GWAS summary statistics· 1 Organism:mouse· 1

Frequent Co-Authors

Helga Thorvaldsdóttir· 2 shared Jill P. MesiroviD· 2 shared Alex Wenzel· 1 shared Amey Gupta· 1 shared Anthony S. CastanzaiD· 1 shared Antony Castanza· 1 shared Bartholomew Tam· 1 shared Carol J. BultiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Helga Thorvaldsdóttir

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 16, 2026

The Multi-scale Copula Index (MCI): a new information-theoretic measure of association and its applications in functional cancer genomics

Timothy Pham, Karina Meneses-Cime, Jiayan Ma…·Pablo Tamayo

The paper introduces the Multi-scale Copula Index (MCI), an information-theoretic measure of association, and demonstrates its utility in cancer genomics for capturing contextual associations in complex datasets.

DOI 10.64898/2026.10.10.758174

GWAS summary statisticsstatistical model

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BioinformaticsbioRxivPreprintOct 24, 2022

The Molecular Signatures Database Revisited: Extending Support for Mouse Data

Anthony S. Castanza, Jill M. Recla, David Eby…·Jill P. Mesirov

The paper extends the Molecular Signatures Database to support mouse gene data by adding mouse-specific gene sets and improved orthology mapping resources.

1 citation

mousebulk RNA-seq

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