Author

Pierre‐Alain Binz

Centre Hospitalier Universitaire VaudoisORCID 0000-0002-0045-7698Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Assay:proteomics· 2

Frequent Co-Authors

Eric W. DeutschiD· 2 shared Jim ShofstahliD· 2 shared Juan Antonio VizcaínoiD· 2 shared Luis MendozaiD· 2 shared Tim Van Den BosscheiD· 2 shared Yasset Pérez‐RiveroliD· 2 shared Andrew CollinsiD· 1 shared Benjamin S PullmaniD· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 42 mutual co-author links

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2 shared papersBioinformatics

Eric W. DeutschORCID

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2 papers

Recent·Most cited

Universal Spectrum Identifier for mass spectra

Eric W. Deutsch, Yasset Pérez‐Riverol, Jeremy Carver, Shin Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Pierre‐Alain Binz, Benjamin S Pullman, Zhi Sun, Jim Shofstahl, Wout Bittremieux, Tytus D. Mak, Joshua Klein, Yunping Zhu, , Nuno Bandeira

The paper introduces the Universal Spectrum Identifier (USI) to standardize referencing mass spectra in proteomics repositories, enabling transparent traceability of spectral evidence in publications.

Nature Methods · Jun 28, 2021Peer-reviewedBioinformatics

Proteomics Standards Initiative Extended FASTA Format (PEFF)

Pierre‐Alain Binz, Jim Shofstahl, Juan Antonio Vizcaíno, Harald Barsnes, Robert J. Chalkley, Gerben Menschaert, Emanuele Alpi, Karl R. Clauser, Jimmy K. Eng, Lydie Lane, Sean L. Seymour, Luis Francisco Hernández Sánchez, Gerhard Mayer, Martin Eisenacher, Yasset Pérez‐Riverol, , Eric W. Deutsch

The paper introduces PEFF, a new format for proteomics data that enhances FASTA with metadata for sequence variants and PTMs, enabling better analysis in proteogenomics and top-down proteomics.

Journal of Proteome Research · May 13, 2019Peer-reviewedBioinformatics