Author

Kausik Chakrabarti

University of North Carolina at CharlotteORCID 0000-0002-0647-7411Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Molecular Biology· 2 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1

Frequent Co-Authors

Abhishek DeyiD· 1 shared Alejandra Ospina· 1 shared Andres V. ReyesiD· 1 shared Andrew W. TrumaniD· 1 shared Arpita SahaiD· 1 shared Arthur G. HuntiD· 1 shared ASHWINI SHIVAKUMAR· 1 shared Bibo LiiD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperMolecular Biology

Abhishek DeyORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

GenomicsRNA BiologyPeer-reviewedOct 28, 2026

Nucleotide-resolution Mapping of RNA N6-Methyladenosine (m6A) modifications and comprehensive analysis of global polyadenylation events in mRNA 3' end processing in malaria pathogen Plasmodium falciparum

Cassandra Catacalos-Goad, Manohar Chakrabarti, Doaa Hassan…·Kausik Chakrabarti

The paper maps m6A modifications and polyadenylation events in Plasmodium falciparum mRNAs, identifying stage-specific m6A sites and their potential role in 3' end processing.

2 citations

humanmouse

𝕏 PostBluesky

Molecular BiologyFrontiers in Cell and Developmental BiologyPeer-reviewedMar 16, 2023

Proteomic Analysis Defines the Interactome of Telomerase in the Protozoan Parasite, Trypanosoma brucei

Justin A. Davis, Andres V. Reyes, Nitika Nitika…·Kausik Chakrabarti

The paper identifies the interactome of TERT in Trypanosoma brucei using mass spectrometry, revealing unique telomerase interactions in this parasite.

4 citations

proteomicsexperimental assay

𝕏 PostBluesky

Molecular BiologyRNA BiologyPeer-reviewedMay 8, 2021

The RNA Structurome in the Asexual Blood Stages of Malaria Pathogen Plasmodium falciparum

Diana Renteria Alvarez, Alejandra Ospina, Tiffany Barwell…·Kausik Chakrabarti

This study measures RNA secondary structures in Plasmodium falciparum during asexual development, finding that ~71% of structured RNAs are protein-coding and that structural content correlates with translation efficiency.

12 citations

humanbulk RNA-seq

𝕏 PostBluesky