Author

Aishwarya Mandava

J. Craig Venter InstituteORCID 0000-0002-0740-7116Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Adrienne P. Gilkes· 1 shared Alessandro SetteiD· 1 shared Arjun KrishnaniD· 1 shared Bali PulendraniD· 1 shared Bjoern PetersiD· 1 shared Christopher D. PetroiD· 1 shared Ferran SoldevilaiD· 1 shared Hao YuaniD· 1 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperSystems Biology

Adrienne P. Gilkes

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Linking Genetic Risk to Disease-Relevant Cellular States via Metacell-Informed Modeling with ICePop

Hao Yuan, Aishwarya Mandava, Kewalin Samart, Julia Ganz, Arjun Krishnan

ICePop links genetic risk to disease-relevant cellular states by analyzing single-cell transcriptomics data across multiple traits, identifying 1,684 disease-cell type associations.

bioRxiv · May 15, 2026 · PreprintGenomics

A system-view of B. pertussis booster vaccine responses in adults primed with whole-cell vs. acellular vaccine in infancy

Ricardo da Silva Antunes, Mikhail Pomaznoy, Ferran Soldevila, Mariana Babor, Jason Bennett, Yuan Tian, Natalie Khalil, Qian Yu, Aishwarya Mandava, Richard H. Scheuermann, Mario Cortese, Bali Pulendran, Christopher D. Petro, Adrienne P. Gilkes, Lisa A. Purcell, , Bjoern Peters

The paper compares immune responses to a Tdap booster in adults primed with acellular (aP) or whole-cell (wP) pertussis vaccines, identifying divergent gene expression and antibody subtype patterns in aP-primed individuals.

JCI Insight · Mar 9, 2021Peer-reviewedSystems Biology