7-UP: generating in silico CODEX from a small set of immunofluorescence markers
Eric Wu, Alexandro E. Trevino, Zhenqin Wu, Kyle Swanson, Honesty Kim, H. Blaize D’Angio, Ryan Preska, Aaron E. Chiou, Gregory W. Charville, Piero D. Dalerba, Umamaheswar Duvvuri, Alexander Dimitrios Colevas, Jelena Levi, Nikita Bedi, Serena Chang, , James Zou
7-UP generates in silico 40-plex CODEX data from a 7-plex mIF panel using cellular morphology, enabling cell type classification and survival prediction across diverse samples.
PNAS Nexus · May 19, 2023Peer-reviewedBioinformatics