Author

Deniz Erdogmus B

Northeastern UniversityORCID 0000-0002-1114-3539Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 4

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:imaging· 3 Approach:deep learning· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1

Frequent Co-Authors

Ajay B. SatputeiD· 1 shared Aria MasoomiiD· 1 shared Ashutosh SinghiD· 1 shared Berkin BilgiçiD· 1 shared Carl‐Fredrik WestiniD· 1 shared Dana H. BrooksiD· 1 shared Edith AguilariD· 1 shared Eric NudlemaniD· 1 shared

Activity by Year

2022-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

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1 shared paperNeuroscience

Ajay B. SatputeORCID

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4 papers

Recent·Most cited

High-SNR Whole-Brain Mesoscale Diffusion MRI Using Rotating-View Acquisitions (ROVER-dMRI)

Qiang Liu, Yunqi Wang, Yiang Pan, Xingwang Yong, YuTing Chen, Hwihun Jeong, Nan Wang, Erpeng Dai, Jarrett Rushmore, Carl‐Fredrik Westin, Lauren J. O’Donnell, Berkin Bilgiç, Kawin Setsompop, Deniz Erdogmus B, Lipeng Ning, Yogesh Rathi A

ROVER-dMRI improves high-SNR whole-brain mesoscale diffusion MRI with reduced scan time and preserved fiber details.

bioRxiv · Oct 1, 2026 · PreprintNeuroscience

Using deep generative models for simultaneous representational and predictive modeling of brain and behavior: A graded supervised-to-unsupervised modeling framework.

Kieran McVeigh, Ashutosh Singh, Deniz Erdogmus B, Lisa Feldman Barrett, Ajay B. Satpute

This paper develops a framework combining generative and discriminative models to evaluate brain-behavior mappings, showing how it captures diverse relationships and identifies assumption violations.

bioRxiv · Dec 23, 2024 · PreprintNeuroscience

M2M-InvNet: Human Motor Cortex Mapping from Multi-Muscle Response Using TMS and Generative 3D Convolutional Network

Md Navid Akbar, Mathew P. Yarossi, Sumientra M. Rampersad, Kyle Lockwood, Aria Masoomi, Eugene Tunik, Dana H. Brooks, Deniz Erdogmus B

This paper develops M2M-InvNet, a generative 3D CNN that maps TMS-induced MEP responses to stimulated regions in the human motor cortex, achieving the best reconstruction accuracy among tested architectures.

IEEE Transactions on Neural Systems and Rehabilitation Engineering · Jan 1, 2024Peer-reviewedNeuroscience

Vascular tortuosity quantification as an outcome metric of the oxygen-induced retinopathy model of ischemic retinopathy

Kyle V. Marra, Jimmy Chen, Hailey Kay Robles-Holmes, Joseph Michael Miller, Guoqin Wei, Edith Aguilar, Yoichiro Ideguchi, Kristine B. Ly, Sofia Prenner, Deniz Erdogmus B, Napoleone Ferrara, J. Peter Campbell, Martin Friedlander, Eric Nudleman

This study quantifies vascular tortuosity in the OIR model, showing it correlates with disease activity and responds to treatment with aflibercept.

bioRxiv · Oct 2, 2022 · PreprintNeuroscience