Author

Saad M. Khan

Harvard UniversityORCID 0000-0002-1385-2056Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:cell-cell communication· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Allegra A. PettiiD· 2 shared Anthony Z. WangiD· 2 shared Gavin P. DunniD· 2 shared Gyeong Dae KimiD· 2 shared Ngima D. SherpaiD· 2 shared Rupen R. DesaiiD· 2 shared Alain CharestiD· 1 shared Albert H. KimiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersCancer Biology

Allegra A. PettiORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMay 14, 2026

Integrated spatial and single-cell transcriptomic analysis of aggressive glioblastoma growth dynamics.

Clara Alves-Pereira, Gyeong Dae Kim, Ngima D. Sherpa…·Allegra A. Petti

This study compares two murine glioblastoma models using single-cell and spatial transcriptomics to reveal distinct tumor-immune dynamics and their correlation with human GBM survival.

DOI 10.64898/2026.05.11.724432

mousescRNA-seq

𝕏 PostBluesky

Cancer BiologybioRxivPreprintApr 4, 2025

Mapping the spatial architecture of glioblastoma from core to edge delineates niche-specific tumor cell states and intercellular interactions

Saad M. Khan, Anthony Z. Wang, Rupen R. Desai…·Allegra A. Petti

This study uses spatial transcriptomics to map glioblastoma's spatial architecture, identifying tumor cell states and intercellular interactions along the core-edge axis.

4 citations

humanspatial transcriptomics

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