Author

Masaru Bamba

Shizuoka UniversityORCID 0000-0002-1486-7524Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Plant Biology· 2 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:plant (other)· 3 Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Research Focus:genome assembly· 1 Assay:Hi-C· 1

Frequent Co-Authors

Shusei SatoiD· 2 shared Akiyoshi Tominaga· 1 shared Atsushi ToyodaiD· 1 shared Hidehiro TohiD· 1 shared Hideki HirakawaiD· 1 shared Hiroshi FujiiiD· 1 shared Jens StougaardiD· 1 shared Kasper R. AnderseniD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersPlant Biology

Shusei SatoORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Plant BiologyNew PhytologistPeer-reviewedApr 4, 2026

Cyclophilin A-mediated cis/trans isomerization modulates RIN4 to control intracellular rhizobial infection in legumes

Takashi Goto, Kasper R. Andersen, Masaru Bamba…·Yasuyuki Kawaharada

This study shows Cyclophilin A modulates RIN4 conformation to control legume infection by rhizobia, revealing a host-symbiont interaction mechanism.

1 citation

plant (other)experimental assay

𝕏 PostBluesky

Plant BiologyDNA ResearchPeer-reviewedJan 9, 2026

Chromosome-level genome assembly of the gerbera (Gerbera hybrida) using HiFi long-read and Hi-C technologies

Yuta Aoyagi Blue, Riki Shimada, Hideki Hirakawa…·Akiyoshi Tominaga

The paper presents a chromosome-level genome assembly of Gerbera hybrida using HiFi and Hi-C technologies, providing annotated nuclear, mitochondrial, and chloroplast genomes.

2 citationstop 5%

plant (other)whole-genome sequencing

𝕏 PostBluesky

Evolutionary BiologybioRxivPreprintFeb 11, 2025

Expanding plant trait databases using large language model: A case study on flower color extraction

Masaru Bamba, Shusei Sato

This paper uses a large language model to extract flower color data from Flora descriptions, expanding the TRY Plant Trait Database and linking it with environmental data to analyze flower color-environment relationships.

1 citation

plant (other)proteomics

𝕏 PostBluesky