Author

Katrin E. Wiese

University of AmsterdamORCID 0000-0002-1603-2846Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 3 Organism:mouse· 3 Research Focus:cell type annotation· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Nika HeijmansiD· 2 shared Renée van AmerongeniD· 2 shared Alexandru OdainiciD· 1 shared Antonius L. van BoxteliD· 1 shared Brandon MaloneiD· 1 shared Colin E.J. PritchardiD· 1 shared Hassen KarediD· 1 shared Ingeborg B. HooijkaasiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersDevelopmental Biology

Nika HeijmansORCID

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Author profile →

3 papers

Recent·Most cited

Machine Learning-Driven Antigen Selection Reveals Conserved T-Cell Targets for Broad Coronavirus Vaccination

Lorenzo Federico, Alexandru Odainic, Katrine Persgård Lund, Ingrid Marie Egner, Katrin E. Wiese, Lisette A. H. M. Cornelissen, Hassen Kared, Richard Stratford, Sebastian Kapell, Brandon Malone, Marius Gheorghe, Pierre Machart, Raman Siarheyeu, Yuki Tanaka, Trevor Clancy, , Ludvig A. Munthe

This study identifies conserved T-cell targets across betacoronaviruses using machine learning and validates their immunogenicity through functional assays and mRNA vaccination in mice.

bioRxiv · Apr 3, 2026 · PreprintImmunology

GRHL and PGR control WNT4 expression in the mammary gland via 3D looping of conserved and species-specific enhancers

Yorick Bernardus Cornelis van de Grift, Marleen T. Aarts, Katrin E. Wiese, Nika Heijmans, Ingeborg B. Hooijkaas, Colin E.J. Pritchard, Linda Henneman, Paul Krimpenfort, Antonius L. van Boxtel, Renée van Amerongen

The paper identifies GRHL and PGR proteins as regulators of WNT4 expression in mammary glands through 3D chromatin looping mechanisms.

bioRxiv · Apr 11, 2025 · PreprintDevelopmental Biology

Transcriptomic analysis of pubertal and adult virgin mouse mammary epithelial and stromal cell populations

Nika Heijmans, Katrin E. Wiese, Jos Jonkers, Renée van Amerongen

The paper analyzes bulk RNAseq data from mouse mammary epithelial and stromal cells during puberty and adult virgin estrous cycles to study gene expression changes related to hormone fluctuations.

Journal of Mammary Gland Biology and Neoplasia · Jun 25, 2024Peer-reviewedDevelopmental Biology