Author

Pavel Solanský

University of TübingenORCID 0000-0002-1608-8655Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:experimental assay· 2 Assay:scRNA-seq· 2 Organism:Arabidopsis· 1 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1

Frequent Co-Authors

Marja C.P. TimmermansiD· 2 shared Alessia Del ChiaroiD· 1 shared Andrew J. deMelloiD· 1 shared Anika DolataiD· 1 shared David LackoiD· 1 shared David R. KovariD· 1 shared Edgar Demesa-ArévaloiD· 1 shared Eduard Volf· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersPlant Biology

Marja C.P. TimmermansORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

CascadeMAP: Autonomous Closed-loop Optimization of Enzyme Cascades via Microfluidics, Machine Learning and Agentic AI

Michal Vasina, David R. Kovar, Martin Kizovský, David Lacko, Pavel Vaňáček, Maximilian Herich, Eduard Volf, Lukas Drdla, Soňa Cabalová, Pavlína Sikorová, Michael Jirásek, Pavel Solanský, Jan Ježek, Ota Samek, Filip Dousek, , Zbyněk Prokop

Unattended droplet-microfluidic Bayesian optimization of a glycerol detection cascade matched design of experiments (DoE) with one third of the conditions; a second cascade used DoE with Raman readout.

bioRxiv · Oct 21, 2026 · PreprintBiochemistry✦ In-depth digest

A single-cell transcriptome atlas of the barley root apical meristem uncovers conserved and divergent roles of HvWOX5

Anika Dolata, Jasper Staut, Edgar Demesa-Arévalo, Tianyu Lan, Gabriele Buchmann, Pavel Solanský, Lea Sophie Berg, Michael Thomas Raissig, Marja C.P. Timmermans, Maria von Korff, Rüdiger GW Simon, Klaas Vandepoele, Yvonne Stahl

The paper creates a single-cell transcriptome atlas of barley root apical meristem, identifying 24 cell populations and showing HvWOX5's role in meristem organization and metaxylem patterning.

bioRxiv · Jun 16, 2026 · PreprintPlant Biology

Autophagy acts as a spatial organizer of cell-type-specific plant immunity

Shanshuo Zhu, Manuel González‐Fuente, Ophélie Léger, Gautier Langin, Ke Xu, N. Hakan Aydin, Nico Schulz, Pavel Solanský, Tom Denyer, Alessia Del Chiaro, Xinchao Wang, Qiang‐Nan Feng, Yasin Dagdas, Marja C.P. Timmermans, Şuayib Üstün

This study shows autophagy coordinates cell-type-specific immunity in plants by modulating immune responses in guard cells and mesophyll cells during Pseudomonas syringae infection.

bioRxiv · Jun 2, 2026 · PreprintPlant Biology