Author

Nitin Nitin

University of British ColumbiaORCID 0000-0002-1662-6011Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biochemistry· 1 Bioinformatics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:host-pathogen & immune response· 2 Organism:bacteria (other)· 1 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Wesley F. ZandbergiD· 2 shared A.B. BorastoniD· 1 shared Andrew G. HettleiD· 1 shared Avani MahadikiD· 1 shared Bailey E. McGuireiD· 1 shared Benjamin PluvinageiD· 1 shared Brendon J MedleyiD· 1 shared Brian R. WasikiD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersCell Biology

Wesley F. ZandbergORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Cell BiologyiSciencePeer-reviewedOct 29, 2026

Intestinal epithelial Casd1 influences mucus sialic acid O-acetylation and tissue damage susceptibility toward large-intestinal mucosal insults.

Simin Jafaripour, Mackenzie Melvin, Megan Turluk…·Kirk Bergstrom

This study investigates the role of Casd1 in sialic acid O-acetylation of intestinal mucus and its impact on tissue damage susceptibility in mice.

DOI 10.1016/j.isci.2026.117978

mouseproteomics

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BiochemistryJournal of Biological ChemistryPeer-reviewedSep 16, 2025

The complete {lambda}-carrageenan depolymerization cascade from a marine Pseudoalteromonad revealed by structural analysis of the enzymes.

Chelsea J. Vickers, Andrew G. Hettle, Joanne K. Hobbs…·A.B. Boraston

This study reveals the complete enzymatic cascade for {lambda}-carrageenan depolymerization in Pseudoalteromonas distincta using structural analysis of ten glycoside hydrolases and five sulfatases.

6 citations

bacteria (other)structural biology

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BioinformaticsbioRxivPreprintMay 12, 2023

CRGEM: Cellular Reprogramming using mechanism-driven Gene Expression Modulation

Avani Mahadik, Nitin Nitin, Justin Jose, Vivek Singh

The paper introduces a computational workflow for predicting transcription factors to achieve cellular reprogramming, providing mechanistic insights into gene regulatory networks.

DOI 10.1101/2023.05.12.540496

humanbulk RNA-seq

𝕏 PostBluesky