Author

Noori Sotudeh

Dana-Farber Cancer InstituteORCID 0000-0002-1683-7273Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:database / resource· 2 Assay:spatial transcriptomics· 2 Assay:ATAC-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Jonah Silverman· 2 shared Joshua Barnett· 2 shared Liya WangiD· 2 shared Poorvi Rao· 2 shared Amy Guillaumet-AdkinsiD· 1 shared Andrew E. PlaceiD· 1 shared Birgit KnoecheliD· 1 shared Jens G. LohriD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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Curved chords = mutual co-authorship

2 shared papersBioinformatics

Jonah Silverman

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Altered immune and treatment response gene expression signatures among poverty-exposed children with B-ALL

Amy Guillaumet-Adkins, Noori Sotudeh, Sayalee V. Potdar, Tushara Vijaykumar, Monica S. Nair, Valeriya Dimitrova, Julia Frede, Yana Pikman, Marian H. Harris, Andrew E. Place, Lewis B. Silverman, Jens G. Lohr, Kira O'Neil Bona, Birgit Knoechel

This study identifies transcriptional signatures of steroid resistance and altered immune responses in poverty-exposed children with B-ALL using single-cell RNA sequencing.

bioRxiv · Jan 29, 2026 · PreprintCancer Biology

AtlasXplore: a web platform for visualizing and sharing spatial epigenome data

Joshua Barnett, Noori Sotudeh, Poorvi Rao, Jonah Silverman, Tamara Jafar, Liya Wang

AtlasXplore provides a web platform for visualizing and sharing spatial epigenome data, enabling interactive exploration without requiring advanced computational skills.

Bioinformatics · Jul 20, 2023Peer-reviewedBioinformatics

AtlasXbrowser enables spatial multi-omics data analysis through the precise determination of the region of interest

Joshua Barnett, Jonah Silverman, Molly Wetzel, Poorvi Rao, Noori Sotudeh, Liya Wang

The paper introduces AtlasXbrowser, a tool for processing DBiT image data to extract spatial information for integration with sequencing data.

bioRxiv · May 11, 2022 · PreprintBioinformatics