Author

Xuan Zheng

Institute for Atomic and Molecular PhysicsORCID 0000-0002-1700-9082Unclaimed ORCID profile · follow to get notified of new preprints

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Xuan Zheng1 paper

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Assay:imaging· 2 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Assay:spatial transcriptomics· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Jeroen Sebastiaan van ZoniD· 2 shared Rutger N.U. KokiD· 2 shared Sander J. TansiD· 2 shared Danny FeijteliD· 1 shared Greg J. StephensiD· 1 shared Guizela Huelsz‐Prince· 1 shared Katarzyna BożekiD· 1 shared Laetitia HebertiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersCell Biology

Jeroen Sebastiaan van ZonORCID

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2 papers

Recent·Most cited

NuclearIDTracker resolves intestinal cell identity and lineage dynamics through nuclear phenotypic signatures

Nguyen BT Nguyen, Rutger N.U. Kok, Sira Gevers, Xuan Zheng, Max A. Betjes, Lukas Ritter, Danny Feijtel, Matthew B. Smith, Sam F.B. van Beuningen, Jeroen Sebastiaan van Zon, Sander J. Tans, Maria J. Rodríguez Colman

NuclearIDTracker uses nuclear phenotypic signatures to classify intestinal cell types and track lineage dynamics without fluorescent reporters.

bioRxiv · Aug 27, 2026 · PreprintCell Biology

OrganoidTracker: efficient cell tracking using machine learning and manual error correction

Rutger N.U. Kok, Laetitia Hebert, Guizela Huelsz‐Prince, Yvonne J. Goos, Xuan Zheng, Katarzyna Bożek, Greg J. Stephens, Sander J. Tans, Jeroen Sebastiaan van Zon

OrganoidTracker automates cell tracking in organoids using machine learning and manual error correction, achieving high accuracy with minimal manual intervention.

PLoS ONE · Oct 22, 2020Peer-reviewedBioinformatics