Author

Akira Yamashita

RIKENORCID 0000-0002-1733-0650Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:Ribo-seq· 2 Research Focus:cell-cell communication· 1 Approach:statistical model· 1

Frequent Co-Authors

Mari MitoiD· 2 shared Shintaro IwasakiiD· 2 shared Peixun HaniD· 1 shared Taisei WakigawaiD· 1 shared Takuhiro ItoiD· 1 shared Yasuha KinugasaiD· 1 shared Yuichi ShichinoiD· 1 shared Yuichiro MishimaiD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 26 mutual co-author links

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2 shared papersMolecular Biology

Mari MitoORCID

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2 papers

Recent·Most cited

Ultra-parallel ribosome profiling platform with RNA-dependent RNA amplification

Yuichi Shichino, Mari Mito, Yasuha Kinugasa, Taisei Wakigawa, Akira Yamashita, Yuichiro Mishima, Yumiko Imai, Shintaro Iwasaki

The paper develops a semi-automated Ribo-Seq and Disome-Seq platform to analyze translation status across many samples, identifying factors regulating translation and revealing links between stop codon readthrough and mitochondrial translation deficiency in COVID-19.

bioRxiv · Aug 6, 2025 · PreprintMolecular Biology

Sense codon-misassociated eRF1 elicits ribosome stalling and induction of quality control

Peixun Han, Mari Mito, Akira Yamashita, Takuhiro Ito, Shintaro Iwasaki

This study shows that eRF1 transiently binds to UUA sense codons, causing ribosome stalling and triggering quality control mechanisms in human cells.

bioRxiv · Sep 1, 2024 · PreprintMolecular Biology