Author

Mary E. Barter

Jackson LaboratoryORCID 0000-0002-1737-9323Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:genome assembly· 2 Organism:mouse· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Anuj SrivastavaiD· 2 shared Ian T. FiddesiD· 2 shared Laura G. ReinholdtiD· 2 shared Vishal SarsaniiD· 2 shared Benedict PateniD· 1 shared Beth L. DumontiD· 1 shared Charlotte LindqvistiD· 1 shared Chrystal SnowiD· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersGenomics

Anuj SrivastavaORCID

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3 papers

Recent·Most cited

GeneticsMammalian GenomePeer-reviewedJul 1, 2025

Low-coverage whole-genome sequencing facilitates accurate and cost-effective haplotype reconstruction in complex mouse crosses

Samuel J. Widmayer, Lydia K. Wooldridge, Emily Swanzey…·Daniel M. Gatti

This study shows that low-coverage whole-genome sequencing (lcWGS) accurately reconstructs haplotypes in complex mouse crosses, outperforming SNP arrays and ddRADseq at low sequencing depths.

2 citations

mousewhole-genome sequencing

𝕏 PostBluesky

GenomicsG3 Genes Genomes GeneticsPeer-reviewedApr 18, 2019

The genome of C57BL/6J \"Eve\", the mother of the laboratory mouse genome reference strain

Vishal Sarsani, Narayanan Raghupathy, Ian T. Fiddes…·Laura G. Reinholdt

The paper generates a new de novo genome assembly for C57BL/6J Eve, addressing genetic drift in the reference strain and improving genomic accuracy.

64 citations

mousewhole-genome sequencing

𝕏 PostBluesky

GenomicsDNA ResearchPeer-reviewedOct 4, 2018

Genome assembly and gene expression in the American black bear provides new insights into the renal response to hibernation.

Anuj Srivastava, Vishal Sarsani, Ian T. Fiddes…·Ron Korstanje

This study identifies 169 differentially expressed genes in black bear kidneys during hibernation, highlighting potential mechanisms for avoiding kidney damage.

32 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky