Author

Soumya Negi

Biogen (United States)ORCID 0000-0002-1756-8626Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:database / resource· 2 Research Focus:software / tool· 2 Approach:experimental assay· 1 Organism:human· 1 Assay:proteomics· 1

Frequent Co-Authors

Baohong ZhangiD· 3 shared David SextoniD· 2 shared Derrick Cheng· 2 shared Dongdong LiniD· 2 shared Fergal CaseyiD· 2 shared Jing ZhuiD· 2 shared Benbo GaoiD· 1 shared Kejie LiiD· 1 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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3 shared papersBioinformatics

Baohong ZhangORCID

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3 papers

Recent·Most cited

BioinformaticsComputational and Structural Biotechnology JournalPeer-reviewedJan 1, 2022

OmicsView: omics data analysis through interactive visual analytics

Fergal Casey, Soumya Negi, Jing Zhu…·Baohong Zhang

OmicsView provides an interactive platform for analyzing omics data, enabling researchers to explore disease pathology and identify biomarkers using preprocessed datasets.

6 citations

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsJournal of Molecular BiologyPeer-reviewedDec 28, 2021

CellDepot: A unified repository for scRNA-seq data and visual exploration

Dongdong Lin, Yirui Chen, Soumya Negi…·Baohong Zhang

CellDepot provides a web platform for uploading, querying, and comparing scRNA-seq datasets with visualization tools to support data sharing and analysis.

14 citations

scRNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedApr 19, 2021

Quickomics: exploring omics data in an intuitive, interactive and informative manner

Benbo Gao, Jing Zhu, Soumya Negi…·Baohong Zhang

Quickomics is an R Shiny tool for interactive exploration of omics data analysis results, offering customizable modules and visualization options.

18 citations

bulk RNA-seqproteomics

𝕏 PostBluesky