Author

Louis Gall

University of BirminghamORCID 0000-0002-1805-2357Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biophysics· 1 Molecular Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:fluorescence / live-cell microscopy· 1

Frequent Co-Authors

Carmen PiniD· 2 shared Aimée ParkeriD· 1 shared Ambra Bianco· 1 shared Brinda BalasubramanianiD· 1 shared Carrie A. DuckworthiD· 1 shared Daniel J. NievesiD· 1 shared David Mark PritchardiD· 1 shared Dylan M. OweniD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersMolecular Biology

Carmen PinORCID

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3 papers

Recent·Most cited

BiophysicsbioRxivPreprintAug 19, 2026

SynthMLM: A framework for interpretable analysis and synthetic localisation data generation for SMLM

Louis Gall, Sandeep Shirgill, Helen E. Abbott…·Dylan M. Owen

SynthMLM generates synthetic localisation data for SMLM using interpretable structural descriptors from experimental data, enabling benchmarking and testing of analysis methods.

DOI 10.64898/2026.08.12.743882

imagingfluorescence / live-cell microscopy

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Molecular BiologyStem Cell Research & TherapyPeer-reviewedDec 21, 2025

Intestinal Stem and Progenitor Cells Exhibit Distinct Adaptive Responses to Inflammatory Stress in IBD

Brinda Balasubramanian, Shivam Patel, Louis Gall…·Paloma Ordóñez‐Morán

The paper examines how intestinal stem and progenitor cells respond to inflammation in IBD, finding distinct transcriptional changes and new immune-responsive cell states.

7 citationstop 5%

humanbulk RNA-seq

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Systems BiologyeLifePeer-reviewedDec 8, 2023

Homeostasis, injury and recovery dynamics at multiple scales in a self-organizing intestinal crypt

Louis Gall, Carrie A. Duckworth, Ferran Jardí…·Carmen Pin

This paper presents a multi-scale agent-based model of intestinal crypt dynamics, showing how signaling pathways and feedback loops govern homeostasis, injury, and recovery.

11 citations

experimental assay

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