Shailesh Kumar

Abiotic Stress-Mediated Modulation of the tncRNome: Unraveling tRNA-Derived RNA Networks in Plant Adaptive Responses

The paper identifies abiotic stress-responsive tncRNAs in rice and chickpea, showing their potential role in plant stress adaptation.

Variations in regulatory sequences rewire gene networks that differentiate wild and cultivated rice for leaf development and photosynthesis

This study identifies regulatory sequence variations that rewired gene networks, leading to differences in leaf development and photosynthesis between wild and cultivated rice.

M6A reader protein YTHDF3 regulates cardiomyocyte death and atrophy by modulating the alternative splicing program

This study shows YTHDF3 regulates cardiomyocyte death and atrophy by modulating alternative splicing, particularly of CaMKIIδ, in the heart.

PtRNAdb: A web resource of Plant tRNA genes from a wide range of plant species

PtRNAdb is a plant-specific tRNA gene database containing sequences from 106 nuclear, 89 plastidial, and 38 mitochondrial genomes, with tools for analysis and comparison.

AlnC: An extensive database of long non-coding RNAs in Angiosperms

AlnC is a database containing 10.8 million annotated lncRNA transcripts from 809 tissues of 682 flowering plants, providing tools for exploration and analysis.

AhNGE : A Database for Arachis hypogaea Nodule Developmental Gene Expression

AhNGE provides RNAseq data and ortholog analysis for peanut nodule development, enabling comparative genomics with other legumes and non-legumes.

Transfer RNA-derived non-coding RNAs (tncRNAs): Uncovering hidden regulators of transcriptional regulatory circuits in plants

This study identifies and characterizes tncRNAs in plants using sRNA-seq, revealing their roles in gene regulation, development, and stress responses.