Author

Ahmed S. N. Alhendi

University College LondonORCID 0000-0002-1883-2142Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cell Biology· 1 Evolutionary Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Assay:CITE-seq· 1

Frequent Co-Authors

Hugh Selway‐ClarkeiD· 3 shared Adam PennycuickiD· 2 shared Kate H.C. GowersiD· 2 shared Sam M. JanesiD· 2 shared A Y Zhao· 1 shared Amyn BhamaniiD· 1 shared Annabel Kunzemann-Martinez· 1 shared Anob M. ChakrabartiiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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Focal author (center)Selected co-authorORCID co-authorUnlinked name

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3 shared papersSystems Biology

Hugh Selway‐ClarkeORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Multi-omics reveals a monocyte-macrophage-fibroblast axis in post-COVID-19 fibroinflammatory lung remodelling

Puja Mehta, Connar M. Mawer, Gordon Beattie, David J. F. Smith, Fadi Nikola, Hugh Selway‐Clarke, A Y Zhao, Taylor Sterling Adams, Annabel Kunzemann-Martinez, Stefan Cristian Stanel, Kaylee B. Worlock, Masahiro Yoshida, Rachel Walters, Sian Goldsworthy, Imran Uddin, , Rachel Clare Chambers

This study identifies a monocyte-macrophage-fibroblast axis in post-COVID-19 lung fibrosis using multi-omic profiling and shows its potential as a therapeutic target.

bioRxiv · Sep 14, 2026 · PreprintSystems Biology

Podoplanin expression identifies human airway basal cells with higher progenitor cell potential

Sarah E. Clarke, Charlotte Percival, Adam Pennycuick, Zoe E. Whiteman, Yuki Ishii, Sandra Gómez‐López, Maral J. Rouhani, Ahmed S. N. Alhendi, Jessica C. Orr, Hugh Selway‐Clarke, Marie-Belle El Mdawar, Zoe Hagel, Kate E J Otter, Chuen Ryan Khaw, Helen Hall, , Sam M. Janes

This study identifies podoplanin (PDPN) as a marker for human airway basal cells with high progenitor potential, enabling efficient sorting of airway stem cells.

bioRxiv · Dec 19, 2025 · PreprintCell Biology

Recovery of human upper airway epithelium after smoking cessation is driven by a slow-cycling stem cell population and immune surveillance

Hugh Selway‐Clarke, Kate H.C. Gowers, VITOR HUGO TEIXEIRA, Calum Gabbutt, Carlos Martínez‐Ruiz, Ahmed S. N. Alhendi, Benjamin D. Simons, Benjamin A. Hall, Nicholas McGranahan, Anob M. Chakrabarti, Sam M. Janes, Adam Pennycuick

bioRxiv · Aug 26, 2025 · PreprintEvolutionary Biology