Author

Patrick Rosendahl Andreassen

ETH ZurichORCID 0000-0002-2104-4518Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 1 Organism:mouse· 1 Research Focus:software / tool· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Hailey SounartiD· 1 shared Ireen van Dolderen· 1 shared Julia A. VorholtiD· 1 shared Sami SaarenpääiD· 1 shared Sofia RouotiD· 1 shared Solène FrapardiD· 1 shared Stefania GiacomelloiD· 1 shared Sybil A. Herrera-Foessel· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Hailey SounartORCID

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1 paper

Recent·Most cited

ProbeST: a custom probe design pipeline for Spatial Transcriptomics

Sofia Rouot, Ireen van Dolderen, Patrick Rosendahl Andreassen, Solène Frapard, Sybil A. Herrera-Foessel, Hailey Sounart, Sami Saarenpää, Julia A. Vorholt, Stefania Giacomello

ProbeST designs custom probe sets for spatial transcriptomics, validated on mouse enteroids infected with Salmonella, enabling detection of host and pathogen transcripts.

bioRxiv · Aug 29, 2025 · PreprintBioinformatics