Author

Demir Akin

Stanford MedicineORCID 0000-0002-2296-4674Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:proteomics· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Hülya ToruniD· 2 shared Uğur AygüniD· 2 shared Uğur ParlataniD· 2 shared Utkan DemirciiD· 2 shared Ayse Aslihan Gokaltun· 1 shared Bharti SingaliD· 1 shared Chris Nguyen· 1 shared Furkan Kaysin· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersBioengineering

Hülya TorunORCID

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2 papers

Recent·Most cited

Glio-SERS: Label-Free Molecular Profiling of Plasma Extracellular Vesicles in Brain Tumors Using SERS and Artificial Intelligence

Hülya Torun, Uğur Parlatan, Tim Valencony, Demir Akin, Chris Nguyen, Özgür Albayrak, Furkan Kaysin, Uğur Aygün, Bharti Singal, Mehmet Ozgün Ozen, Rana Cansu Egitimci, İbrahim Kulaç, Oğuz Baran, Göktuğ Akyoldaş, İhsan Solaroğlu, Utkan Demirci

This study develops Glio-SERS, a method combining SERS and AI to profile plasma extracellular vesicles in brain tumors, showing 88% accuracy in distinguishing glioblastoma and meningioma from healthy controls.

bioRxiv · Apr 23, 2026 · PreprintBioengineering

SHINE: SERS-based Hepatotoxicity detection using Inference from Nanoscale Extracellular vesicle content

Uğur Parlatan, Luke Boudreau, Hülya Torun, Letao Fan, Uğur Aygün, Ayse Aslihan Gokaltun, Demir Akin, Osman Berk Usta, Utkan Demirci

The paper introduces a SERS-based method to detect hepatotoxicity by analyzing extracellular vesicle content, showing strong correlations with conventional toxicity biomarkers.

bioRxiv · Jan 30, 2025 · PreprintBiophysics