Author

Yuan Li

Centers for Disease Control and PreventionORCID 0000-0002-2331-2694Unclaimed ORCID profile · follow to get notified of new preprints

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Yuan Li13 papers · Lund University

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Benjamin J. MetcalfiD· 1 shared Corin YeatsiD· 1 shared Harry C. H. HungiD· 1 shared Lesley McGeeiD· 1 shared Narender KumariD· 1 shared Paulina A. HawkinsiD· 1 shared Stephanie W. LoiD· 1 shared Stephen D. BentleyiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 36 mutual co-author links

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1 shared paperGenomics

Benjamin J. MetcalfORCID

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1 paper

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedSep 24, 2025

A Portable and Scalable Genomic Analysis Pipeline for Streptococcus pneumoniae Surveillance: GPS Pipeline

Harry C. H. Hung, Narender Kumar, Victoria R. Carr…·Stephanie W. Lo

The paper introduces GPS Pipeline, a scalable and portable genomic analysis tool for Streptococcus pneumoniae, enabling public health outputs with minimal expertise.

13 citationstop 1%

bacteria (other)whole-genome sequencing

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