Author

Justin M. Wozniak

Argonne National LaboratoryORCID 0000-0002-2441-2048Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Ahmadreza GhaffarizadehiD· 1 shared Azza E. AhmediD· 1 shared Charles M. MacaliD· 1 shared Chase CockrelliD· 1 shared Daniel S. KatziD· 1 shared Elliott Rodriguez· 1 shared Faisal M. FadlelmolaiD· 1 shared Gary C. AniD· 1 shared

Activity by Year

2018-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperSystems Biology

Ahmadreza GhaffarizadehORCID

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2 papers

Recent·Most cited

Managing genomic variant calling workflows with Swift/T

Azza E. Ahmed, Jacob R. Heldenbrand, Yan W. Asmann, Faisal M. Fadlelmola, Daniel S. Katz, Katherine I. Kendig, Matthew C. Kendzior, Tiffany Li, Yingxue Ren, Elliott Rodriguez, Matthew R. Weber, Justin M. Wozniak, Jennie Zermeno, Liudmila Sergeevna Mainzer

The paper describes a Swift/T wrapper for the GATK variant calling workflow to improve portability and maintainability across cluster environments.

PLoS ONE · Jul 9, 2019Peer-reviewedBioinformatics

High-throughput cancer hypothesis testing with an integrated PhysiCell-EMEWS workflow

Jonathan Ozik, Nicholson T. Collier, Justin M. Wozniak, Charles M. Macal, Chase Cockrell, Samuel H. Friedman, Ahmadreza Ghaffarizadeh, Randy W. Heiland, Gary C. An, Paul Macklin

This paper introduces a high-throughput framework integrating PhysiCell and EMEWS to test cancer hypotheses through mechanistic simulations and optimize therapeutic strategies.

BMC Bioinformatics · Dec 1, 2018Peer-reviewedSystems Biology