Author

Quentin Clayssen

SIB Swiss Institute of BioinformaticsORCID 0000-0002-2574-073XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

Abdullah Al NahidiD· 1 shared Alessio MilaneseiD· 1 shared Anthony T. PapenfussiD· 1 shared Boyd TarlintoniD· 1 shared Charlotte SonesoniD· 1 shared Chi-Lam PooniD· 1 shared Daniel R. MendeiD· 1 shared Eric S. DavisiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperBioinformatics

Abdullah Al NahidORCID

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2 papers

Recent·Most cited

The tidyomics ecosystem: Enhancing omic data analyses

William J. Hutchison, Timothy Keyes, Helena Lucia Crowell, Jacques Serizay, Charlotte Soneson, Eric S. Davis, Noriaki Sato, Lambda Moses, Boyd Tarlinton, Abdullah Al Nahid, Miha Kosmač, Quentin Clayssen, Victor Yuan, Wancen Mu, Ji-Eun Park, , Stefano Mangiola

The paper introduces tidyomics, an ecosystem bridging Bioconductor and tidy R to streamline omic analysis using data from the Human Cell Atlas.

Nature Methods · Jun 14, 2024Peer-reviewedBioinformatics

Reference genome-independent taxonomic profiling of microbiomes with mOTUs3

Hans‐Joachim Ruscheweyh, Alessio Milanese, Lucas Paoli, Nicolai Karcher, Quentin Clayssen, Marisa Isabell Metzger, Jakob Wirbel, Peer Bork B, Daniel R. Mende, Georg Zeller, Shinichi Sunagawa

The paper introduces mOTUs3, a tool for reference genome-independent taxonomic profiling of metagenomes, improving accuracy and coverage for underexplored microbiomes.

bioRxiv · Apr 20, 2021 · PreprintBioinformatics