Anna Vathrakokoili Pournara

Human Developmental Cell Atlas integrates ~4.6 million cells/nuclei from 4-22 post-conception weeks into 454 refined cell types and maps 114 spatial niches across 6PCW whole-embryo sections.

scDenorm reverts normalized single-cell omics data to raw counts to improve integration and reduce biases in downstream analysis.

This paper develops a molecular trajectory-based framework to model MASLD progression using transcriptomic and proteomic data, identifying novel biomarkers and mechanistic insights.

This paper evaluates 31 cell-type deconvolution methods across human and mouse tissues, identifies regression-based methods as effective, and introduces the CATD pipeline for reproducible analysis.