Philippe Youkharibache

The paper introduces IgStrand, a universal residue numbering scheme for Ig-folds to enable systematic annotation and analysis of Ig-proteomes and Ig-interactomes across species.

The paper identifies novel Ig-domain features in Porifera, suggesting potential primitive adaptive immunity mechanisms.

The paper describes the evolution of iCn3D from a web-based 3D viewer to a batch-mode structural analysis tool with Node.js scripts for large-scale structural dataset analysis.

The paper reviews the pseudo-symmetric properties of Ig domains, focusing on the double Ig fold in CD19 to understand their structural versatility and implications for protein engineering.

The paper introduces iCn3D, a web-based tool for collaborative structural analysis of molecular interactions related to COVID-19, enabling efficient sharing and visualization of 3D data and sequence annotations.

The paper analyzes 7-TMH proteins across multiple superfamilies to reveal pseudo-symmetry and conformational plasticity in their evolution.

The paper provides a survey-based analysis of the structural properties and functional diversity of small β-barrel domains.

The paper proposes twelve elements for 3D visualization and analysis of biological molecules in web-based molecular viewers to enhance structural interpretation and integration with sequence data.