Author

Joseph Tsz Kei Wu

Laboratory of Data Discovery for HealthORCID 0000-0002-3155-5987Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Organism:human· 1 Research Focus:phylogenetics / evolution· 1 Assay:scRNA-seq· 1 Organism:virus· 1

Frequent Co-Authors

Aurélie BisiauxiD· 1 shared Camille de CevinsiD· 1 shared Cheuk Kwong LeeiD· 1 shared Darragh DuffyiD· 1 shared David Keith SmithiD· 1 shared Étienne PatiniD· 1 shared Francesca LucaiD· 1 shared Gaspard KerneriD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperGenomics

Aurélie BisiauxORCID

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2 papers

Recent·Most cited

Robust expansion of phylogeny for fast-growing genome sequence data

Yongtao Ye, Marcus Ho-Hin Shum, Joseph L.-H. Tsui, Guangchuang Yu, David Keith Smith, Huachen Zhu, Joseph Tsz Kei Wu, Yi Guan, Tommy Tsan‐Yuk Lam

The paper introduces TIPars, an algorithm for efficiently expanding phylogenies with new genome sequences, showing it outperforms existing methods on multiple datasets.

PLoS Computational Biology · Feb 8, 2024Peer-reviewedBioinformatics

Environmental and genetic drivers of population differences in SARS-CoV-2 immune responses

Yann Aquino, Aurélie Bisiaux, Zhi Li, Mary B. O’Neill, Javier Mendoza‐Revilla, Sarah Hélène Merkling, Gaspard Kerner, Milena Hasan, Valentina Libri, Vincent Bondet, Nikaïa Smith, Camille de Cevins, Mickaël Mathieu Ménager, Francesca Luca, Roger Piqué-Regi, , Lluís Quintana‐Murci

The paper identifies environmental and genetic factors influencing population differences in SARS-CoV-2 immune responses using single-cell RNA-sequencing data.

bioRxiv · Nov 22, 2022 · PreprintGenomics