Author

Alex Chitsazan

BioNano Genomics (United States)ORCID 0000-0002-3518-5039Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Developmental Biology· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Aaron J. GrossbergiD· 1 shared Alex R. HastieiD· 1 shared Alka ChaubeyiD· 1 shared Andy Wing Chun PangiD· 1 shared Arthi Sridhar· 1 shared Benjamin Clifford· 1 shared Beth L. WorleyiD· 1 shared Brent A. WilkersoniD· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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1 shared paperCancer Biology

Aaron J. GrossbergORCID

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3 papers

Recent·Most cited

Cancer BiologyJournal of Cachexia Sarcopenia and MusclePeer-reviewedMar 19, 2026

Impaired adipose anabolism in pancreatic cancer cachexia is reversed by HuR inhibition

Paige C. Arneson‐Wissink, Katherine R. Pelz, Beth L. Worley…·Aaron J. Grossberg

This study identifies impaired adipose anabolism in pancreatic cancer cachexia and shows that HuR inhibition restores adipose anabolism in mice.

1 citation

mousebulk RNA-seq

𝕏 PostBluesky

Genetic & Genomic MedicinemedRxivPreprintDec 27, 2022

Clinical Validation of Optical Genome Mapping for the Detection of Structural Variations in Hematological Malignancies

Andy Wing Chun Pang, Karena A. Kosco, Nikhil Sahajpal…·Alka Chaubey

This study validates optical genome mapping (OGM) as a clinical test for detecting structural variations in hematological malignancies, showing high accuracy and sensitivity compared to standard-of-care methods.

2 citations

humanwhole-genome sequencing

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Developmental BiologybioRxivPreprintSep 3, 2019

STAT pathway activation limits the Ascl1-mediated chromatin remodeling required for neural regeneration from Muller glia in adult mouse retina.

Nikolas L. Jorstad, Matthew S. Wilken, Levi J. Todd…·Thomas A. Reh

This study shows that STAT pathway activation limits Ascl1-mediated chromatin remodeling in Muller glia, reducing their ability to regenerate neurons in the adult mouse retina.

DOI 10.1101/753483

𝕏 PostBluesky