Hiromi Hirata

InferAging: A non-invasive aging clock for quantifying individual differences in aging

InferAging quantifies biological aging by modeling deviations from chronological age, identifying accelerated and delayed agers in zebrafish using non-invasive phenotypes.

Mitorubin, berberrubine-based compounds that improve mitochondrial function, exhibit cardioprotective effects against age-related cardiac dysfunction

DeLTa-Seq: direct-lysate targeted RNA-Seq from crude tissue lysate.

The paper introduces DeLTa-Seq, a method for targeted RNA-Seq from crude tissue lysates, enabling cost-effective and high-throughput gene expression analysis without RNA purification.

Intracellular and intercellular gene regulatory networks inference from time-course individual RNA-Seq

The paper infers gene regulatory networks from time-course bulk RNA-Seq data to reveal both intracellular and intercellular regulatory relationships during development.

Tensor Decomposition-based Unsupervised Feature Extraction Succeeded in Identification of Differentially Expressed Transcripts from Redundant de novo Transcriptome of Planarian

This study uses tensor decomposition-based unsupervised feature extraction to identify differentially expressed transcripts in planarian RNA-seq data with a highly redundant de novo transcriptome, outperforming conventional methods.