Takaaki Matsui

InferAging: A non-invasive aging clock for quantifying individual differences in aging

InferAging quantifies biological aging by modeling deviations from chronological age, identifying accelerated and delayed agers in zebrafish using non-invasive phenotypes.

Fgf3 and Fgf10a regulate neuronal fasciculation through Schwann cell proliferation and infiltration in zebrafish posterior lateral line

Zero-shot reconstruction of mutant spatial transcriptomes

This paper introduces a zero-shot framework to predict spatial transcriptomes of mutants using single-cell RNA sequencing data without requiring spatial reference atlases.

Twinfilin-1 phosphorylation in reelin signaling regulates actin dynamics and spine development

This study identifies Twinfilin-1 phosphorylation as a key component of reelin signaling that regulates actin dynamics and spine development in neurons.

Noise-resistant developmental reproducibility in vertebrate somite formation

This study develops a computational model of ERK-mediated somitogenesis to show how the segmentation clock maintains noise-resistant developmental reproducibility in vertebrate somite formation.

Size-reduced embryos reveal a gradient scaling based mechanism for zebrafish somite formation

The paper shows that a dynamically scaling gradient in the presomitic mesoderm regulates somite size control in zebrafish embryos.