Xinhai Pan

PantheonOS introduces a multi-agent framework for automated genomics analysis, achieving super-human performance in batch correction and gene panel selection across diverse biological tasks.

LineageMap infers spatially resolved cell lineage trees from tri-modal single-cell data, outperforming existing methods in accuracy and revealing biologically coherent trajectories.

TemSOMap integrates lineage data with spatial transcriptomics to improve cell spatial coordinate inference.

LinRace improves lineage reconstruction by integrating lineage barcodes and gene expression data, producing more accurate cell division trees and inferring ancestral cell states.

TedSim simulates cell division events and generates scRNA-seq and lineage barcode data to benchmark methods for cell lineage analysis.