Author

Fernando D. Villarreal

Consejo Nacional de Investigaciones Científicas y TécnicasORCID 0000-0002-4034-1243Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Assay:protein sequence· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Research Focus:database / resource· 1

Frequent Co-Authors

Nicolás Stocchi· 3 shared Agustín AmalfitanoiD· 2 shared Arjen ten HaveiD· 2 shared Hugo Marcelo Atencio· 2 shared Adrian Gustavo TurjanskiiD· 1 shared Alejandro Sebastian MechalyiD· 1 shared Andrés BlancoiD· 1 shared Ezequiel Jorge SosaiD· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersGenomics

Nicolás Stocchi

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintMar 27, 2023

De novo assembly of the black flounder genome. Why do pleuronectiformes have such a small genome size?

Fernando D. Villarreal, Germán Burguener, Ezequiel Jorge Sosa…·Alejandro Sebastian Mechaly

This study assembles the black flounder genome and investigates why Pleuronectiformes have a small genome size, finding that reduced transcript size, particularly exon number and large introns, contributes to this reduction.

DOI 10.1101/2023.03.27.534153

whole-genome sequencingstatistical model

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GenomicsbioRxivPreprintMar 15, 2023

Comprehensive characterization of the complex BAHD acyltransferase family from 218 land plants species: phylogenomic analysis and identification of specificity determinant positions

Fernando D. Villarreal, Agustín Amalfitano, Hugo Marcelo Atencio…·Arjen ten Have

This paper characterizes the BAHD acyltransferase family across 218 land plant species using phylogenomics to identify specificity determining positions and functional annotations.

DOI 10.1101/2023.03.15.532435

plant (other)protein sequence

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BioinformaticsbioRxivPreprintMar 22, 2022

Seqrutinator: Non-Functional Homologue Sequence Scrutiny for the Generation of large Datatsets for Protein Superfamily Analysis

Agustín Amalfitano, Nicolás Stocchi, Hugo Marcelo Atencio…·Arjen ten Have

Seqrutinator identifies and removes non-functional homologue sequences from proteomes to improve multiple sequence alignments in plant superfamilies.

1 citation

plant (other)protein sequence

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