Viorel Munteanu

A comprehensive benchmark of discrepancies across microbial genome reference databases

The paper benchmarks discrepancies across microbial genome reference databases, finding high consistency in viral genomes but significant variability in fungal genomes.

Leveraging a hybrid cross-disciplinary training model to accelerate global bioinformatics capacity

This paper introduces a hybrid training model to enhance bioinformatics capacity globally, demonstrating its effectiveness through an Eastern European workshop series.

Robust software development practices improve citations of RNA-seq tools

This study shows that better software development practices for RNA-seq tools lead to more citations, as evidenced by a strong statistical association between development quality and citation counts.

A benchmark for large language models in bioinformatics

This study benchmarks large language models in bioinformatics tasks, finding GPT-4 leads in most areas while Gemini excels in math and LLaMA struggles with code generation.

The systematic assessment of completeness of public metadata accompanying omics studies in the Gene Expression Omnibus

This study assesses metadata completeness in public omics studies, finding that most important phenotypes are often omitted, with only 11.5% of studies fully sharing all phenotypes.