Author

H. Joachim Deeg

Fred Hutch Cancer CenterORCID 0000-0002-4426-9023Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:human· 2 Approach:Bayesian inference· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:clustering· 1

Frequent Co-Authors

Alexander K.C. WongiD· 1 shared Axia SongiD· 1 shared Benjamin J. Hindson· 1 shared Christopher M. Hindson· 1 shared Christopher McFarlandiD· 1 shared Derek L. StirewaltiD· 1 shared Don A. Masquelier· 1 shared Elizabeth A. BonneriD· 1 shared

Activity by Year

2017-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperGenomics

Alexander K.C. WongORCID

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2 papers

Recent·Most cited

Cancer BiologybioRxivPreprintAug 14, 2025

CDK8 is a critical effector of cell fate dysregulation in SF3B1-mutant MDS

Elizabeth A. Bonner, Tun‐Yun Hsueh, Axia Song…·Stanley Chun-Wei Lee

This study identifies CDK8 mis-splicing as a driver of altered progenitor fate in SF3B1-mutant MDS, linking splicing defects to transcriptional dysregulation and lineage commitment.

1 citation

humanbulk RNA-seq

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GenomicsNature CommunicationsPeer-reviewedJan 16, 2017

✦ In-depth digest

Massively parallel digital transcriptional profiling of single cells

Grace X. Y. Zheng, Jessica M. Terry, Phillip Belgrader…·Jason H. Bielas

8-channel GemCode droplet barcoding captures ∼50% of loaded cells for 3′ mRNA counting, profiling 68k peripheral blood mononuclear cells and calling transplant chimerism from transcript variants.

7,356 citationstop 1%

humanmouse

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