Author

Elias K. Zegeye

GenentechORCID 0000-0002-5130-582XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1

Frequent Co-Authors

Barath UdayasuryaniD· 1 shared Christopher M. RoseiD· 1 shared Elena K. PerryiD· 1 shared Josué A. Rodríguez-RamosiD· 1 shared Kirsten HofmockeliD· 1 shared Man‐Wah TaniD· 1 shared Mike ReicheltiD· 1 shared Natalie SadleriD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperMicrobiology

Barath UdayasuryanORCID

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2 papers

Recent·Most cited

Microbiologynpj Biofilms and MicrobiomesPeer-reviewedDec 4, 2025

A microbiota-derived bile acid modulates biofilm formation by the probiotic strain Escherichia coli Nissle 1917

Elena K. Perry, Barath Udayasuryan, Elias K. Zegeye…·Man‐Wah Tan

This study shows that the bile acid lithocholic acid promotes biofilm formation by the probiotic Escherichia coli Nissle 1917, enhancing its ability to compete with pathogens.

3 citations

E. coliexperimental assay

𝕏 PostBluesky

MicrobiologymSystemsPeer-reviewedFeb 24, 2025

Environmental matrix and moisture are key determinants of microbial phenotypes expressed in a reduced complexity soil-analog

Josué A. Rodríguez-Ramos, Natalie Sadler, Elias K. Zegeye…·Kirsten Hofmockel

The paper investigates how soil moisture and structure affect microbial phenotypes in a simplified soil analog system, revealing key roles of chitin-degrading bacteria and stress responses in carbon use efficiency.

7 citations

metagenomicsstatistical model

𝕏 PostBluesky