Author
Rockefeller UniversityORCID 0000-0002-6879-3954Unclaimed ORCID profile · follow to get notified of new preprints
Mutual co-authors in cluster
13 papers
Recent·Most cited
Léa Soler-Clavel, Manu Kumar Gundappa, Atlantine Boggio‐Pasqua…·Emily Humble
The paper generates high-quality genome assemblies for two manta and devil ray species and identifies structural variations linked to pelagic adaptation.
Josephine R. Paris, Linelle Ann L. Abueg, Sarah E. Pelan…·Daniele Salvi
The paper presents a chromosome-level genome assembly for the European leaf-toed gecko, providing a high-quality reference for studying genome evolution and sex chromosome dynamics.
Daniel N. Jackson, Erik R. Funk, Linelle Ann L. Abueg…·Scott A. Taylor
This study investigates speciation in boobies through genomic analysis, finding introgression, divergence patterns, and a neo-sex chromosome linked to coloration diversity.
Giulio Formenti, Dominic E. Absolon, Linelle Ann L. Abueg…·Fergal J. Martin
The Vertebrate Genomes Project Phase I provides high-quality reference genomes for 816 species, enabling evolutionary and conservation insights across vertebrates.
William R. Thomas, Tanya M. Lama, Cecilia Baldoni…·Liliana M. Dávalos
The paper identifies genomic and transcriptomic changes associated with chromosomal instability and seasonal brain size plasticity in the Eurasian common shrew.
Henry Paul Granger-Neto, Isaac Rafael Freitas Borges, Davi Barbalho Cavalcanti…·Fabrício Rodrigues dos Santos
The paper presents the first chromosome-level genome assembly of the Brazilian merganser, revealing genomic features and population history insights.
Claudia Fontsere, Samuel A. Speak, Andrew J. Caven…·Hernán E. Morales
The paper analyzes genomic diversity loss in whooping cranes despite population recovery, finding 70% genetic diversity loss and increased inbreeding.
Carlos Daniel Cadena, Laura Pabón, Carlos DoNascimiento…·Mauricio Torres
The paper presents a chromosome-scale reference genome for the Andean cavefish Trichomycterus rosablanca to study evolutionary mechanisms in cave environments.
Delphine Larivière, Linelle Ann L. Abueg, Nadolina Brajuka…·Giulio Formenti
The paper presents a scalable pipeline for reference genome assembly and evaluation, demonstrating its effectiveness across 51 vertebrate species using Galaxy.
Marcela Uliano‐Silva, João Gabriel R. N. Ferreira, Ksenia Krasheninnikova…·Shane McCarthy
MitoHiFi assembles mitochondrial genomes from PacBio HiFi reads, identifying heteroplasmy variants and excluding nuclear contaminants, and has been used to assemble 374 mitochondrial genomes.
Theodore E. Squires, Patrik Rödin‐Mörch, Giulio Formenti…·Kristinn Pétur Magnússon
The paper presents a high-quality chromosome-level genome assembly for the Rock Ptarmigan, providing a reference for studying its evolution and climate change impacts.
Simona Secomandi, Guido Roberto Gallo, Marcella Sozzoni…·Giulio Formenti
The paper presents a pangenome for the barn swallow and identifies genes under selection linked to synanthropy and domestication traits.
Giulio Formenti, Linelle Ann L. Abueg, Angelo Brajuka…·Erich David Jarvis
Gfastats, a C++ tool, computes genome assembly statistics in linear time, converts between FASTA, FASTQ and GFA files, and edits assemblies through a bidirected graph.