Gaofei Jiang

Long-read metagenomic sequencing reveals novel lineages and functional diversity in urban soil microbiome

The paper uses long-read metagenomic sequencing to analyze urban soil samples, revealing novel microbial lineages and extensive functional diversity.

Pharmaceuticals residues lead to enrichment of Human, Animal, and Plant Pathogens in Wastewater

This study shows that common pharmaceuticals increase pathogen abundance and biodiversity in wastewater, posing a biohazard risk.

LorMe: a streamlined and interoperable R framework for end-to-end microbiome analysis

LorMe provides a unified R framework for microbiome analysis, offering an end-to-end pipeline with reproducibility and interoperability across tools.

Substrate utilization and cross-feeding synergistically determine microbiome resistance to pathogen invasion

This study uses genome-scale models and synthetic communities to show that substrate utilization and cross-feeding synergistically determine microbiome resistance to pathogen invasion.

Spatiotemporal changes in soil properties predict plant health at continental scale

The paper predicts plant health using spatiotemporal changes in soil properties with 84% accuracy across multiple climates and cropping systems.

The population dynamics of a bacterial pathogen after host re-infection affects the founding population size

This study investigates how host re-infection affects pathogen founding population size, showing that increased temperature reduces founding population size by limiting subsequent re-infection contributions.